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VMG Yachtbuilders

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  • Netherlands
  • Volmolen 91601 ET EnkhuizenThe Netherlands

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 Structures from the PDB
 Computed Structure Models (CSM)

PDB-101

  • Structure Summary
  • Annotations
  • FASTA Sequence
  • mmCIF Format
  • mmCIF Format (Header)
  • PDB Format (Header)
  • PDBx/mmCIF Format
  • PDBx/mmCIF Format (gz)
  • BinaryCIF Format (gz)
  • PDB Format (gz)
  • PDBML/XML Format (gz)
  • Structure Factors (CIF)
  • Structure Factors (CIF - gz)
  • Validation Full PDF
  • Validation (XML - gz)
  • Validation (CIF - gz)
  • Biological Assembly 1 (CIF - gz) 
  • Biological Assembly 2 (CIF - gz) 
  • Biological Assembly 1 (PDB - gz)
  • Biological Assembly 2 (PDB - gz)

Crystal structure of GSK-3 26-383 bound to Axin 383-435

  • PDB DOI:  https://doi.org/10.2210/pdb8VMG/pdb
  • Classification:  TRANSFERASE/SIGNALING PROTEIN
  • Organism(s):  Mus musculus , Homo sapiens
  • Expression System:  Escherichia coli BL21(DE3)
  • Mutation(s):  No 
  • Deposited:  2024-01-13  Released:  2024-08-28 
  • Deposition Author(s):  Enos, M.D. , Gavagan, M. , Jameson, N. , Zalatan, J.G. , Weis, W.I.
  • Funding Organization(s):  National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method:  X-RAY DIFFRACTION
  • Resolution:  2.45 Å
  • R-Value Free:  0.230 
  • R-Value Work:  0.195 
  • R-Value Observed:  0.195 

Starting Model: experimental View more details

wwPDB Validation     3D Report   Full Report

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Ligand Structure Quality Assessment  

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Structural and functional effects of phosphopriming and scaffolding in the kinase GSK3beta

(2024) Sci Signal 

  • DOI:  https://doi.org/10.1126/scisignal.ado0881

  Explore in 3D :  Structure | Sequence Annotations | Validation Report | Ligand Interaction  (ADP)

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

  • Total Structure Weight: 101.72 kDa 
  • Atom Count: 6,672 
  • Modelled Residue Count: 778 
  • Deposited Residue Count: 848 
  • Unique protein chains: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Glycogen synthase kinase-3 beta , 364 : 0 

 (PDB Primary Data),   (PDB Primary Data)
   
Sequence Clusters
UniProt Group
MoleculeChains Sequence LengthOrganismDetailsImage
Axin-1 , 60 : 0 
, 
   
 
Sequence Clusters
UniProt Group
Ligands 8 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions



E [auth A]
C H N O P
XTWYTFMLZFPYCI-KQYNXXCUSA-N		 Interactions  



TA [auth B]
C H N O S
SXGZJKUKBWWHRA-UHFFFAOYSA-N		 Interactions  



Less
O S
QAOWNCQODCNURD-UHFFFAOYSA-L		 Interactions  



CA [auth A],
N [auth A],
R [auth A],
W [auth A]
C H O
PEDCQBHIVMGVHV-UHFFFAOYSA-N		 Interactions  



Less
C H O
LYCAIKOWRPUZTN-UHFFFAOYSA-N		 Interactions  



Less
N O
NHNBFGGVMKEFGY-UHFFFAOYSA-N		 Interactions  



Less
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M		 Interactions  



NA [auth A]
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N		 Interactions  

Experimental Data

  • Space Group:  P 6 5 2 2
Length ( Å )Angle ( ˚ )
a = 195.585α = 90
b = 195.585β = 90
c = 152.204γ = 120
Software NamePurpose
Blu-Icedata collection
XDSdata reduction
pointlessdata scaling
Aimlessdata scaling
PHENIXphasing
PHENIXrefinement
Cootmodel building

Structure Validation

View  Full Validation Report

Ligand Structure Quality Assessment 

Deposition data.

  • Released Date:  2024-08-28 
Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM131747
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM119156
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM007276

Revision History   (Full details and data files)

  • Version 1.0: 2024-08-28 Type: Initial release
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RCSB PDB ( citation ) is hosted by

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  • wwPDB Partners

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute , National Institute of Allergy and Infectious Diseases , and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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IMAGES

  1. Our dream

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  2. Home

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  3. SDH turned the hull of our newest project.

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  4. New Project: Bestevaer 51 refit

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  5. VMG Yachtbuilders viert eerste Lustrum!

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  6. Huisman 64 "Yonder"

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VIDEO

  1. sphere spins, but in wrong plane; around wrong axis

  2. Sea trials Truly Classic 78 "bontekoning" after refit at VMG Alicante (Long version)

  3. KM Yachtbuilders Turning Bestevaer 36 S/Y

  4. KM Yachtbuilders Bestevaer 36 powered by Oceanvolt ServoProp 15

  5. Bestevaer 53ST Aegle Iceland and Greenland

  6. Elle Marine Group Brokerage Division

COMMENTS

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  2. About us

    The people at VMG share a deep passion for building yachts. We are based in Enkhuizen in the region West-Friesland, which has a yacht building tradition that goes back several centuries. First, wooden fishing vessels and cargo boats, then yachts. Our builders are the offspring of generations of yacht builders, where knowledge and skill have ...

  3. Private owner

    At VMG Yachtbuilders, we use dedicated accountancy software for 100% transparency and accountability. Contract negotiations, led by your owner's representative, finalize terms with the yard and suppliers. Once negotiations come to an end, contracts are signed, solidifying commitments.

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    VMG Yachtbuilders, Enkhuizen. 1,167 likes · 55 talking about this · 43 were here. VMG Yachtbuilders is builder of semi-custom and custom build yachts, specialised in top notch yacht

  5. VMG Yachtbuilders Yachts For Sale and Charter

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    VMG Yachtbuilders has 5 employees across 3 locations. See insights on VMG Yachtbuilders including office locations, competitors, revenue, financials, executives, subsidiaries and more at Craft.

  7. Brand owner

    At VMG Yachtbuilders, we don't just build yachts; we craft legacies. With decades of experience in yacht building, we understand the intricacies of transforming a passion for yachting into a distinguished brand. Over the years, we've witnessed the journeys of numerous brand owners, each with their unique aspirations and challenges. From a ...

  8. VMG Yachtbuilders Yachts For Sale and Charter

    VMG Yachtbuiders located in the center of Holland and has a modern production for the construction of sailing and motor yachts to order. The company also has a service center for the complete cycle maintenance of the yachts in the centre of Enkhuizen (Holland).

  9. Velocity prediction program for windsurfing: A ...

    This velocity polar chart also provides valuable information regarding the VMG, which can be calculated by projecting the sailing velocity onto the wind direction. At the wind speed of 7 m/s, the maximum VMG for a sailor weighing 80 kg, with the attributes shown in Fig. 7 (a) is approximately 45° for upwind sailing and 130° for downwind ...

  10. 8VMG: Crystal structure of GSK-3 26-383 bound to Axin 383-435

    Funding Organization Location Grant Number; National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) United States

  11. PDF Registrant Full Name Organization Name City, State, Zip

    Ignacio Olavide Olavide Wood Products BV Huizen, NH 1272 NA Dan Simon Olympic Forest Products Inc. Erin, ON N0B 1T0 Tyler Atkins Onsite Technologies LLC Greensboro, NC 27455 ... Lukas Pujauskas VMG Technics Klaipėda, LT-92498 Zaneta Pujauskiene VMG Technics Klaidpeda, KL LT-92498 Dave Ginther Voice Directed Tally Systems, Inc. Belleville, ON ...

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  13. PDF Dendrite-free Lithium Based on Lessons Learned from Lithium and

    ½Evap) and ionized (ionization energy ½Eion) while leaving a vacancy in the metal (vacancy formation energy½Ef).The Mn+ ion was then dissolved into the electrolyte (solvation energy½Esol) while the electrons returned to the metal electrode accord- ing to the reverse of work functionðWf Þ on a zero-charged metal. Therefore, the re-action energyðDE0Þ for each Li and Mg electrodeposition ...

  14. International private equities at the end of H1 2024

    VMG Catalyst, L.P. USA 6.0 VMG Partners II, L.P. USA 6.5 VMG Partners III, L.P. USA 8.3 VMG Partners IV Co-Investment Fund, L.P. USA 5.3 ... Souza GP B.V. Netherlands 50.0 Group Subsidiaries ACM Strategic Investment Partners IV, LP Cayman Islands 96.3 Apollo Kings Alley Credit Fund, L.P. USA 97.5

  15. News

    Baruna 1938. Starboard side guest cabin forward showing the mainmast and beautiful exposed chainplates. Every inch of Baruna's interior speaks of an unparalleled commitment to excellence by VMG Yachtbuilders. Each and every detail reflects a deep respect. Read more.

  16. Unoterede udenlandske kapitalandele ved halvåret 2024

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  17. Projects Archive

    VMG Yachtbuilders. Volmolen 9. 1601 ET Enkhuizen. (+31)228 322 352. [email protected]. Menu. Professional - Custom built. Professional - Refit. Private owner - Custom built.